How I decided on a second COVID-19 booster shot

Booster shots against COVID-19 are once again on my mind. The U.S. Food and Drug Administration says that older people and immunocompromised people are eligible for a second booster shot provided it has been at least four months since their last shot. After I got over the shock of the FDA calling me “older” — meaning anyone 50 and up — I’ve been pondering whether to get a second booster (otherwise known as a fourth dose of an mRNA vaccine, or third dose of any vaccine if you initially got the Johnson & Johnson vaccine), and if so, when.

Peter, a 60-year-old acquaintance who asked me not to use his last name to protect his privacy, told me he’s going to get a second booster, but not now. He’s holding out for fall and hoping for a variant-specific version of the vaccine. Right now, he and his wife “are vaxxed out,” he says. And he worries that getting boosted too often could hurt his immune system’s ability to respond to new variants. “I just think it’s the law of diminishing returns,” he says.

Lots of scientists and policy makers are thinking about these issues, too. For instance, last week an advisory committee to the U.S. Centers for Disease Control and Prevention met to discuss boosters. And a bevy of studies about how well boosters work and how they affect the immune system have come out in recent weeks, some of them peer-reviewed, some still preliminary.
In making my own decision, I wanted to know several things. First, does a second booster really provide additional protection from the coronavirus beyond what I got from my first booster (SN: 11/8/21)? Second, are there downsides to getting boosted again? And finally, if I’m going to do it, when should that be and which vaccine will I get?

To get a handle on the first question, I need to know how much protection the first booster actually gave me. I’m not immunocompromised, so there’s no reason for me to get an antibody test to see if I have enough of those defenders to fend off the coronavirus. I just have to assume that my immune system is behaving normally and that what’s true for others in my age group also goes for me.

How long does COVID-19 booster immunity last?
Although the exact numbers vary, several studies have found that a third dose of the Pfizer COVID-19 vaccine gave higher levels of protection against the omicron variant than two doses did (SN: 3/1/22). But that protection wanes after a few months.

Data from Israel, where some people have been getting fourth doses for months, suggest that a second booster does indeed bolster protection, but again only temporarily. In health care workers who got a fourth dose, antibody levels shot up above levels achieved after the third jab, researchers reported April 7 in the New England Journal of Medicine. Vaccine effectiveness against infection was 30 percent with the Pfizer shot and 11 percent with Moderna. Both were better at preventing symptomatic disease, with Pfizer weighing in at 43 percent and Moderna at 31 percent. But those who did get infected produced high levels of the virus, suggesting they were contagious to others.

In a separate study published in the same journal, researchers looking at people 60 and older found that a fourth dose gave protection against both infection and severe disease, but the protection against infection began to decline after about five weeks.

There’s more data on protection against severe illness from a study of more than 11,000 people admitted for COVID-19 to a hospital or emergency department in the Kaiser Permanente Southern California health care system. At nine months after the second shot, two doses of the Pfizer vaccine were 31 percent effective at keeping people out of the emergency room with omicron, researchers reported April 22 in Lancet Respiratory Medicine. The shots were 41 percent effective at preventing more severe illness resulting in hospitalizations from the omicron variant.

The third dose (first booster) bumped the effectiveness way up to 85 percent against hospitalization and 77 percent against ER visits, the team found. But the effect was temporary. By three months after the booster, effectiveness had declined to 55 percent against hospitalization and 53 percent against emergency room visits. The same jump in protection and quick waning from the first booster has also been noted in the United Kingdom and Qatar.

It’s been about six months since my first booster shot, so any extra protection I got from it is probably gone by now. But will a fourth dose restore protection?

The CDC calculates that for every million people 50 and older who get a fourth dose of vaccine, 830 hospitalizations, 183 intensive care unit admissions and 85 deaths could be prevented. Those are impressive numbers, but many people think efforts should be focused more on getting still-unvaccinated people immunized instead of worrying about additional shots for the already vaxxed. CDC’s numbers support that. Because unvaccinated people are so vulnerable to the coronavirus, you would need to vaccinate just 135 people aged 50 and older with two shots to prevent one hospitalization. But already vaccinated people still have quite a bit of immunity, so you’d need to vaccinate 1,205 older people with a fourth dose to prevent one hospitalization.
How does my health factor in?
Of course, that’s data concerning populations. I and millions of others are trying to make individual calculations. “People need to make decisions based on their health condition as well as their exposure levels,” says Prakash Nagarkatti, an immunologist at the University of South Carolina School of Medicine Columbia. For instance, people whose jobs or other activities put them in contact with lots of people have higher exposure risks than someone who works at home. People who are older or have underlying health conditions, such as diabetes, obesity, high blood pressure, or lung, kidney, liver and heart diseases are all at higher risk. Those people might benefit from a shot now. “But if you’re 50 to 60 and very healthy, I don’t know if you need it right away,” Nagarkatti says. “You could maybe wait a few months.”

I’ve got some health risks that may make me more likely to get severely ill, and I have a couple of big events coming up this summer where I could get exposed to the virus. So getting boosted now to get a little bump in immunity that should last for a few months seems like a good idea. I’m also basing that decision about when to get a booster on what’s happening with the virus.

Case counts in my county are on the upswing. Nationally, BA.2.12.1, a potentially even wilier subvariant of the already slippery BA.2 omicron variant, is on the rise, making up almost 29 percent of cases in the week ending April 23. South Africa is experiencing a rise in cases caused by the omicron subvariants BA.4 and BA.5. It could be the start of a fifth wave of infection in that country, something researchers thought wouldn’t happen because so many people there were previously infected and vaccinated, Jacob Lemieux, an infectious disease researcher at Massachusetts General Hospital in Boston said April 26 in a news briefing. “It has the flavor of, ‘Here we go, again,’” he said. “So much for the idea of herd immunity.”

Are there any downsides to a second booster?
But would I be harming my immune system if I get a booster shot now? Previous experience with vaccines against other viruses suggests repeated boosting isn’t always a good thing, Galit Alter, codirector of the Harvard University Center for AIDS Research said in the news briefing. For instance, in one HIV vaccine trial, people were boosted six times with the same protein. Each time their antibody levels went up, but the researchers found that the immune system was making nonfunctional, unhelpful antibodies that blocked the action of good ones. So far, that hasn’t happened with the COVID-19 vaccines, but it could be important to space out doses to prevent such a scenario.

Another worry for immunologists is original antigenic sin. That has nothing to do with apples, serpents and gardens. Instead it happens when the immune system sees a virus or portion of the virus for the first time and trains memory cells to make antibodies against the virus. The next time the person encounters the virus or another version of it, instead of adding to the antibody arsenal, it continues to make only those original antibodies.

With the coronavirus, though, “what’s happened is the opposite of antigenic sin,” says Michel Nussenzweig, an immunologist and Howard Hughes Medical Institute investigator at Rockefeller University in New York City. He and colleagues examined what happens to the immune response after a third dose of vaccine, focusing especially on very long-lived immune cells called memory B cells. Those memory cells still made new antibodies when they got a third look at the vaccine, Nussenzweig and colleagues reported April 21 in Nature. That wouldn’t happen if antigenic sin were a problem. And it’s great news since an ever-growing repertoire of antibodies may help defend against future variants.

A separate Nature Immunology study found that other immune cells called T cells also learn new tricks after a booster dose or a breakthrough infection. Those and other studies seem to indicate that getting a booster isn’t bad for my immune system and could help me against future variants.

Is it okay to mix and match COVID-19 booster shots?
Now the question is, which booster to get? Mixing vaccines doesn’t seem to push the immune system toward making the unhelpful antibodies, Alter said. It “tantalizes the immune system with different flavors of vaccines, and seems to reawaken it,” she said. “Even mixing and matching mRNAs may be highly advantageous to the immune system.” She and colleagues found that the Moderna vaccine may make more IgA antibodies, the type that help protect mucous membranes in the nose, mouth and other slick surfaces in the body from infection, than the Pfizer vaccine does. Pfizer’s makes more of the IgM and IgG antibodies that circulate in the blood, data published March 29 in Science Translational Medicine show.

Since I got the Pfizer vaccine for my first three doses, it seems wise to shake things up with Moderna this time. I’ve already booked my shot.

As for Peter, after I laid out the evidence, he said he was convinced that he should probably get a shot now, as his doctor recommends. But he admitted he might just wait to see if Moderna comes out with an updated version of its vaccine.

What’s really needed, all the experts tell me, is to better understand how the immune system operates so researchers can build better vaccines with longer-lasting protection so we won’t be facing needles multiple times per year.

This camera lens can focus up close and far away at the same time

Ben Franklin had nothing on trilobites.

Roughly 400 million years before the founding father invented bifocals, the now extinct trilobite Dalmanitina socialis already had a superior version (SN: 2/2/74). Not only could the sea critter see things both near and far, it could also see both distances in focus at the same time — an ability that eludes most eyes and cameras.

Now, a new type of camera sees the world the way this trilobite did. Inspired by D. socialis’s eyes, the camera can simultaneously focus on two points anywhere between three centimeters and nearly two kilometers away, researchers report April 19 in Nature Communications.
“In optics, there was a problem,” says Amit Agrawal, a physicist at the National Institute of Standards and Technology in Gaithersburg, Md. If you wanted to focus a single lens to two different points, you just simply could not do it, he says.

If a camera could see like a trilobite, Agrawal figured, it could capture high-quality images with higher depths of field. A high depth of field — the distance between the nearest and farthest points that a camera can bring into focus — is important for the relatively new technique of light-field photography, which uses many tiny lenses to produce 3-D photos.

To mimic the trilobite’s ability, the team constructed a metalens, a type of flat lens made up of millions of differently-sized rectangular nanopillars arranged like a cityscape — if skyscrapers were one two-hundredth the width of a human hair. The nanopillars act as obstacles that bend light in different ways depending on their shape, size and arrangement. The researchers arranged the pillars so some light traveled through one part of the lens and some light through another, creating two different focal points.
To use the device in a light-field camera, the team then built an array of identical metalenses that could capture thousands of tiny images. When combined, the result is an image that’s in focus closeup and far away, but blurry in between. The blurry bits are then sharpened with a type of machine learning computer program.

Achieving a large depth of field can help the program recover depth information, says Ivo Ihrke, a computational imaging scientist at the University of Siegen in Germany who was not involved with this research. Standard images don’t contain information about the distances to objects in the photo, but 3-D images do. So the more depth information that can be captured, the better.

The trilobite approach isn’t the only way to boost the range of visual acuity. Other cameras using a different method have accomplished a similar depth of field, Ihrke says. For instance, a light-field camera made by the company Raytrix contains an array of tiny glass lenses of three different types that work in concert, with each type tailored to focus light from a particular distance. The trilobite way also uses an array of lenses, but all the lenses are the same, each one capable of doing all the depth-of-focus work on its own — which helps achieve a slightly higher resolution than using different types of lenses.

Regardless of how it’s done, all the recent advances in capturing depth with light-field cameras will improve imaging techniques that depend on that depth, Agrawal says. These techniques could someday help self-driving cars to track distances to other vehicles, for example, or Mars rovers to gauge distances to and sizes of landmarks in their vicinity.

Why you should care about ‘The Insect Crisis’

Imagine a world without insects. You might breathe a sigh of relief at the thought of mosquito-free summers, or you might worry about how agriculture will function without pollinators. What you probably won’t picture is trudging through a landscape littered with feces and rotting corpses — what a world devoid of maggots and dung beetles would look like.

That’s just a snippet of the horrifying picture of an insect-free future that journalist Oliver Milman paints in the beginning of The Insect Crisis. “The loss of insects would be an agonizing ordeal eclipsing any war and even rivaling the looming ravages of climate breakdown,” he writes. And yet, the threat of an impending “insect apocalypse” doesn’t get nearly the same level of attention as climate change.

Researchers have been observing declining insect populations for decades. For instance, a study of nearly 40 years of data from a protected rainforest in Puerto Rico found that insect biomass had decreased by 98 percent on the ground and 80 percent in the canopy since the mid-1970s.

The threats insects face are many: Light pollution, the increasing use of pesticides and climate change are just a few (SN: 8/31/21; SN: 8/17/16; SN: 7/9/15). And it’s not only rare species that are at risk — it’s also species that were once common around the globe.

The reality of the crisis isn’t as foreboding as Milman initially makes it seem. A world with no insects is unlikely, he acknowledges. Studies have found that while some species are in decline, others, such as freshwater insects, are doing fine (SN: 4/23/20). Rather than viewing the insect crisis as all insect populations on one downward-trending line on a graph, Milman suggests picturing lots of different lines — some holding steady, some sloping up or down, and some zigzagging. “Insects are being shifted to an unhappy state where there will be far more bedbugs and mosquitoes and far fewer bumblebees and monarch butterflies,” he writes.

Those changes in biodiversity come with consequences. Farmers may have to fend off more pests that attack soybeans, for instance, and insect-pollinated fruits and vegetables will become hard to grow at scale. Some insect-eating animals will decline as their food disappears, which has already happened to some birds (SN: 7/11/14), or even vanish. Water and soil quality could also be in jeopardy.
Milman investigates the crisis by sharing his own adventures with insects, along with those of researchers, taking readers from the United States to Mexico, across the Atlantic to Europe and all the way to Australia. By sharing scientists’ stories, he makes the plight of insects personal. There’s a researcher in Denmark who has spent 25 years surveying insect populations by driving his old Ford Anglia down the same country roads and counting the number of bugs squashed against the windshield. Back when he started, he’d regularly have to clean insect guts off his car. But in recent years, he has experienced a lot of “zero insect days.” As I read that, I struggled to remember the last time I had to scrape any dead insects off my car. Another researcher recalls the joy of catching fireflies on his family ranch in Texas as a child. I felt a wave of sadness as I thought about how I don’t see fireflies as much as I did when I was a kid. With more streetlights and the switch to LED bulbs, it’s becoming harder for fireflies to spot potential mates.

Amid the doom and gloom, the book still manages to spark awe and delight with fun facts about insects. Bumblebee wings, for instance, vibrate so fast that they can produce gravitational forces of up to 50 g’s — five times greater than what fighter jet pilots experience. Milman also offers hope, sharing how certain insects are adapting to the threats and how some people are fighting to protect the critters through political campaigns and changing farming habits.

By the book’s end, readers may find that their attitude toward some insects has shifted from loathing to love, or at the very least, appreciation. (I, for one, never cared much for flies — until I learned we wouldn’t have chocolate without them.) Milman makes clear how much we benefit from insects, and what we stand to lose without them. As one researcher puts it, our deeply woven reliance on insects is like the internet: When parts of the network are removed, the less internet there is, “until eventually it doesn’t work anymore.”

A world without the internet would be difficult but livable. The same can’t be said for a world without insects.

All of the bases in DNA and RNA have now been found in meteorites

More of the ingredients for life have been found in meteorites.

Space rocks that fell to Earth within the last century contain the five bases that store information in DNA and RNA, scientists report April 26 in Nature Communications.

These “nucleobases” — adenine, guanine, cytosine, thymine and uracil — combine with sugars and phosphates to make up the genetic code of all life on Earth. Whether these basic ingredients for life first came from space or instead formed in a warm soup of earthly chemistry is still not known (SN: 9/24/20). But the discovery adds to evidence that suggests life’s precursors originally came from space, the researchers say.
Scientists have detected bits of adenine, guanine and other organic compounds in meteorites since the 1960s (SN: 8/10/11, SN: 12/4/20). Researchers have also seen hints of uracil, but cytosine and thymine remained elusive, until now.

“We’ve completed the set of all the bases found in DNA and RNA and life on Earth, and they’re present in meteorites,” says astrochemist Daniel Glavin of NASA’s Goddard Space Flight Center in Greenbelt, Md.

A few years ago, geochemist Yasuhiro Oba of Hokkaido University in Sapporo, Japan, and colleagues came up with a technique to gently extract and separate different chemical compounds in liquified meteorite dust and then analyze them.

“Our detection method has orders of magnitude higher sensitivity than that applied in previous studies,” Oba says. Three years ago, the researchers used this same technique to discover ribose, a sugar needed for life, in three meteorites (SN: 11/22/19).

In the new study, Oba and colleagues combined forces with astrochemists at NASA to analyze one of those three meteorite samples and three additional ones, looking for another type of crucial ingredient for life: nucleobases.

The researchers think their milder extraction technique, which uses cold water instead of the usual acid, keeps the compounds intact. “We’re finding this extraction approach is very amenable for these fragile nucleobases,” Glavin says. “It’s more like a cold brew, rather than making hot tea.”

With this technique, Glavin, Oba and their colleagues measured the abundances of the bases and other compounds related to life in four samples from meteorites that fell decades ago in Australia, Kentucky and British Columbia. In all four, the team detected and measured adenine, guanine, cytosine, uracil, thymine, several compounds related to those bases and a few amino acids.

Using the same technique, the team also measured chemical abundances within soil collected from the Australia site and then compared the measured meteorite values with that of the soil. For some detected compounds, the meteorite values were greater than the surrounding soil, which suggests that the compounds came to Earth in these rocks.

But for other detected compounds, including cytosine and uracil, the soil abundances are as much as 20 times as high as in the meteorites. That could point to earthly contamination, says cosmochemist Michael Callahan of Boise State University in Idaho.

“I think [the researchers] positively identified these compounds,” Callahan says. But “they didn’t present enough compelling data to convince me that they’re truly extraterrestrial.” Callahan previously worked at NASA and collaborated with Glavin and others to measure organic materials in meteorites.

But Glavin and his colleagues point to a few specific detected chemicals to support the hypothesis of an interplanetary origin. In the new analysis, the researchers measured more than a dozen other life-related compounds, including isomers of the nucleobases, Glavin says. Isomers have the same chemical formulas as their associated bases, but their ingredients are organized differently. The team found some of those isomers in the meteorites but not in the soil. “If there had been contamination from the soil, we should have seen those isomers in the soil as well. And we didn’t,” he says.

Going directly to the source of such meteorites — pristine asteroids — could clear up the matter. Oba and colleagues are already using their extraction technique on pieces from the surface of the asteroid Ryugu, which Japan’s Hayabusa2 mission brought to Earth in late 2020 (SN: 12/7/20). NASA’s OSIRIS-REx mission is expected to return in September 2023 with similar samples from the asteroid Bennu (SN: 1/15/19).

“We’re really excited about what stories those materials have to tell,” Glavin says.

Antibiotics diminish babies’ immune response to key vaccines

Taking antibiotics in the first two years of life can prevent babies from developing a robust immune response to certain vaccines. The new finding provides another cautionary tale against overusing antibiotics, researchers say.

Babies get immunized in their first six months, and receive booster doses in their second year, to protect against certain infectious diseases. Antibiotic use during that time was associated with subpar immune responses to four vaccines babies receive to ward off whooping cough, polio and other diseases, researchers report online April 27 in Pediatrics.

And the more rounds of antibiotics a child received, the more antibody levels to the vaccines dropped below what’s considered protective. Levels induced by the primary series of shots for the polio, diphtheria-tetanus-pertussis, Haemophilus influenzae type b and pneumococcal vaccines fell 5 to 11 percent with each antibiotic course. In the children’s second year, antibody levels generated by booster shots of these vaccines dropped 12 to 21 percent per course.
“If anyone needed yet another reason why overprescription of antibiotics is not a good thing, this paper offers that reason,” says immunologist Bali Pulendran of Stanford University School of Medicine, who was not involved in the study.

Taking antibiotics disrupts the population of bacteria that live in the gut. That’s well known, but researchers are still learning about how that disruption can affect a person’s health. The new study adds to evidence that diminishing the amount and diversity of gut bacteria impacts vaccination. In studies in mice, antibiotics hampered the immune system’s response to vaccines. And a small study in humans found that antibiotics dampened adults’ response to the flu vaccine in those whose prior immune memory for influenza had waned, Pulendran and colleagues reported in 2019.

The study in Pediatrics is the first to report an association between antibiotic use and compromised vaccine responses in children. Michael Pichichero, a pediatric infectious diseases specialist at the Rochester General Hospital Research Institute in New York, and colleagues collected blood samples taken from 560 children during routine visits with their pediatricians. Of those, 342 children had been prescribed close to 1,700 courses of antibiotics and 218 children had not gotten the drugs. The team analyzed whether antibody levels induced by the four vaccines met the threshold considered protective and found levels more often fell short for the kids who had gotten antibiotics.

The type and length of antibiotic treatment also made a difference. Broad spectrum drugs were associated with antibody levels below what is protective, while a more targeted antibiotic was not. Furthermore, a 10-day course, but not a five-day course, reduced vaccine-induced antibody levels.

The researchers didn’t look at whether children in the study with diminished antibody levels were more likely to develop vaccine-preventable diseases. But there has been concern about outbreaks of whooping cough, says Pichichero, which have occurred in the the United States despite vaccination (SN: 4/4/14). Perhaps antibiotic use can help explain these outbreaks, he says.

To see what kinds of changes are occurring in the gut bacteria, Pichichero and colleagues are beginning a study with a new group of children. The researchers will collect stool samples along with blood draws and antibiotic use records. They’d like to follow the children past age 5, beyond the time kids receive another round of booster shots, to learn whether antibiotics also interfere with this next opportunity to develop antibodies.

“Antibiotics are miracle medicines,” says Pichichero. “In no way does this study imply that children who need an antibiotic shouldn’t get it.” But if possible, it should be a narrowly targeted antibiotic for a shorter course, he says. Along with the risk of antibiotic resistance that comes with overuse of the drugs (SN: 1/24/22), the impact antibiotics could have on vaccine-induced immunity “has clinical implications for every individual child.”

Leonardo da Vinci’s rule for how trees branch was close, but wrong

Leonardo da Vinci was wrong about trees.

The multitalented, Renaissance genius wrote down his “rule of trees” over 500 years ago. It described the way he thought that trees branch. Though it was a brilliant insight that helped him to draw realistic landscapes, Leonardo’s rule breaks down for many types of trees. Now, a new branching rule — dubbed “Leonardo-like” — works for virtually any leafy tree, researchers report in a paper accepted April 13 in Physical Review E.

“The older Leonardo rule describes the thickness of the branches, while the length of the branch was not taken into account,” says physicist Sergey Grigoriev of the Petersburg Nuclear Physics Institute in Gatchina, Russia. “Therefore, the description using the older rule is not complete.”
Leonardo’s rule says that the thickness of a limb before it branches into smaller ones is the same as the combined thickness of the limbs sprouting from it (SN: 6/1/11). But according to Grigoriev and his colleagues, it’s the surface area that stays the same.

Using surface area as a guide, the new rule incorporates limb widths and lengths, and predicts that long branches end up being thinner than short ones. Unlike Leonardo’s guess, the updated rule works for slender birches as well as it does for sturdy oaks, the team reports.

The connection between the surface area of branches and overall tree structure shows that it’s the living, outer layers that guide tree structure, the researchers say. “The life of a tree flows according to the laws of conservation of area in two-dimensional space,” the authors write in their study, “as if the tree were a two-dimensional object.” In other words, it’s as if just two dimensions — the width of each limb and the distance between branchings on a limb — determine any tree’s structure. As a result, when trees are rendered in two dimensions in a painting or on a screen, the new rule describes them particularly well.
The new Leonardo-like rule is an improvement, says Katherine McCulloh, a botanist at the University of Wisconsin–Madison who was not involved with this study. But she has her doubts about the Russian group’s rationale for it. In most trees, she says, the living portion extends much deeper than the thin surface layer.

“It’s really species-dependent, and even age-dependent,” McCulloh says. “A giant, old oak tree might have a centimeter of living wood … [but] there are certainly tropical tree species that have very deep sapwood and may have living wood for most of their cross sections.”

Still, the fact that the Leonardo-like rule appears to hold for many trees intrigues McCulloh. “To me, it drives home the question of why are [trees] conserving this geometry for their external tissue, and how is that related to the microscopic level differences that we observe in wood,” she says. “It’s a really interesting question.”

To test their rule, Grigoriev and colleagues took photographs of trees from a variety of species and analyzed the branches to confirm that the real-world patterns matched the predictions. The photos offer “a direct measurement of the characteristics of a tree without touching it, which can be important when dealing with a living object,” Grigoriev says.

Though the team hasn’t studied evergreens yet, the rule holds for all of the deciduous trees that the researchers have looked at. “We have applied our methodology to maple, linden, apple,” Grigoriev says, in addition to oak, birch and chestnut. “They show the same general structure and obey the Leonardo-like rule.”

While it’s possible to confirm the rule by measuring branches by hand, it would require climbing into trees and checking all the limbs — a risky exercise for trees and scientists alike. “Note,” the researchers write, “that not a single tree was harmed during these experiments.”